PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00011879_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family FAR1
Protein Properties Length: 147aa    MW: 17225.3 Da    PI: 4.9981
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00011879_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.22.3e-1778146169
                              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvk 69 
                                       +fYn+YA+ vGFs+r+s+ +k k ++ i++r fvCs egkr+ ek++  +  + +raetr +C aklk+k
  FANhyb_icon00011879_a.1.g00001.1  78 EFYNAYAYGVGFSIRRSRFHKDKSDK-IIDRLFVCSAEGKRDCEKDTrYQYVKAHRAETRFECVAKLKIK 146
                                       6*****************99996666.***************9999844556779*************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.3E-1478146IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MDTENSCEEV LIQANSRRKL DFLDGIDLNT SAEDDSAEEK EFEPVEGNEK VDYVHFKVRK  60
ELIPVIGMEF DTEKDAYEFY NAYAYGVGFS IRRSRFHKDK SDKIIDRLFV CSAEGKRDCE  120
KDTRYQYVKA HRAETRFECV AKLKIKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008240644.14e-36PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLM5X1031e-33M5X103_PRUPE; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-13FAR1 family protein